Internal links:

• https://www.sbpdiscovery.org/medical-discovery/shared-resources/bioinformatics-data-management  - official group web site 
• www.proteolysis.org - proteolysis reasoning environment 
• www.bNAber.org - database of HIV-1 broadly neutralizing antibodies 
• samplesurfer.SBPdiscovery.org – Sample Surfer
• http://regulattice.burnham.org - list-based regulon priotization (internal) and 
• http://regulattice.sbpdiscovery.org (external) Both require login/account access
• FFAS server (Dr Godzik) -- Godzik Lab's resource for prediction fold and function based on protein sequences.
• MASCOT server -- Burnham's mass spectoscopy analysis application. Contact the Proteomics Facility for information about this application.

External links:

• NCBI -- Most widely used US government/academic bioinformatics resource.
• EBI -- European Bioinformatics Institute.
• PDB -- Central repository of Protein and nucleic acid structures.
• Ensembl -- European genomic resource.
• UCSC/Golden Path -- Genomic assembly and annotation resource (David Haussler, Jim Kent at UCSC). 
  UCSC Genome Browser Training from OpenHelix.com
• Expasy -- US mirror for Expasy (including protein database SwissProt)
• JCSG -- Joint Center for Structural Genomics. A project to solve all protein structures from a target organism. The Bioinformatics Core is run by A. Godzik of the Burnham Institute.
• PFAM -- Standard tool to annotate domains present in protein sequences.
• TIGR -- Genomic resource.
• Sanger Center -- European genomic resource.
• SOURCE@Stanford
  -- place to get annotation for list of genes/probes (microarray riented)
• KEGG -- Biochemical pathways resource.
• ChemBank @Harvard -- Chemical Genomics resource with chemical libraries and screening assay data.
• MicroArray Design and Analysis Guide -- well written and to-the-point introduction